VIS: FIJI/ImageJ within CVL for light microscopy

Instructor: Dr Nicholas Condon (UQ) and Dr Kathryn Hall (NIF)

Please join us to learn how to FIJI/ImageJ within the CVL desktop for light microscopy images.

Topics covered:

• Lattice light data
• 3D viewer
• Scripting, macros and batch processing

This is a hands-on workshop that will be hosted online.  Firstly there will be a short introductory presentation, and this will be followed by guided step-by-step procedures.  Please come ready to login to CVL and follow the steps along with Nicholas.  There will be time during and afterwards to ask questions and practice working with your own data.

****Registration is required by ASAP to allow for set-up with IT****

If you do not have a CVL account or need refreshing, please contact kathryn.hall@uq.edu.au for assistance.

References:

Rueden, C. T.; Schindelin, J. & Hiner, M. C. et al. (2017), “ImageJ2: ImageJ for the next generation of scientific image data”, BMC Bioinformatics 18:529, PMID 29187165, doi: 10.1186/s12859-017-1934-z.